Two-dimensional patterns in bacterial veils arise from self-generated, three-dimensional fluid flows.
نویسندگان
چکیده
The behavior of collections of oceanic bacteria is controlled by metabolic (chemotaxis) and physical (fluid motion) processes. Some sulfur-oxidizing bacteria, such as Thiovulum majus, unite these two processes via a material interface produced by the bacteria and upon which the bacteria are transiently attached. This interface, termed a bacterial veil, is formed by exo-polymeric substances (EPS) produced by the bacteria. By adhering to the veil while continuing to rotate their flagella, the bacteria are able to exert force on the fluid surroundings. This behavior induces a fluid flow that, in turn, causes the bacteria to aggregate leading to the formation of a physical pattern in the veil. These striking patterns are very similar in flavor to the classic convection instability observed when a shallow fluid is heated from below. However, the physics are very different since the flow around the veil is mediated by the bacteria and affects the bacterial densities. In this study, we extend a model of a one-dimensional veil in a two-dimensional fluid to the more realistic two-dimensional veil in a three-dimensional fluid. The linear stability analysis indicates that the Peclet number serves as a bifurcation parameter, which is consistent with experimental observations. We also solve the nonlinear problem numerically and are able to obtain patterns that are similar to those observed in the experiments.
منابع مشابه
Swarming in viscous fluids: Three-dimensional patterns in swimmer- and force-induced flows.
We derive a three-dimensional theory of self-propelled particle swarming in a viscous fluid environment. Our model predicts emergent collective behavior that depends critically on fluid opacity, mechanism of self-propulsion, and type of particle-particle interaction. In "clear fluids" swimmers have full knowledge of their surroundings and can adjust their velocities with respect to the lab fram...
متن کاملThree-dimensional characteristic approach for incompressible thermo-flows and influence of artificial compressibility parameter
In this paper the characteristics of unsteady three-dimensional incompressible flows with heat transfer are obtained along with artificial compressibility of Chorin. At first, compatibility equations and pseudo characteristics for three-dimensional flows are derived from five governing equations (continuity equation, Momentum equations in three directions, and energy equation) and then results ...
متن کاملImplementation of D3Q19 Lattice Boltzmann Method with a Curved Wall Boundary Condition for Simulation of Practical Flow Problems
In this paper, implementation of an extended form of a no-slip wall boundary condition is presented for the three-dimensional (3-D) lattice Boltzmann method (LBM) for solving the incompressible fluid flows with complex geometries. The boundary condition is based on the off-lattice scheme with a polynomial interpolation which is used to reconstruct the curved or irregular wall boundary on the ne...
متن کاملCollective swimming and the dynamics of bacterial turbulence.
To swim, a bacterium pushes against the fluid within which it is immersed, generating fluid flow that dies off on a length scale comparable to the size of the bacterium. However, in dense colonies of bacteria, the bacteria are close enough that flow generated by swimming is substantial. For these cases, complex flows can arise due to the interaction and feedback between the bacteria and the flu...
متن کاملApplication of the Schwarz-Christoffel Transformation in Solving Two-Dimensional Turbulent Flows in Complex Geometries
In this paper, two-dimensional turbulent flows in different and complex geometries are simulated by using an accurate grid generation method. In order to analyze the fluid flow, numerical solution of the continuity and Navier-Stokes equations are solved using CFD techniques. Considering the complexity of the physical geometry, conformal mapping is used to generate an orthogonal grid by means of...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Bulletin of mathematical biology
دوره 73 1 شماره
صفحات -
تاریخ انتشار 2011